Fortnight Papers

The EPSCI group attempts to keep up with recent software activities in the field by reviewing another paper every fortnight(=2 weeks). The table below lists the papers themselves along with links to any discussion notes. Most of these we will try and pull from journals listed on the EPSCI publications page, however papers from any source may be considered . Suggestions for papers to review are welcome!

Fortnight Papers

Journal	Title	Discussion date	Discussion Notes
arXiv.org	AI-assisted Automated Workflow for Real-time X-ray Ptychography Data Analysis via Federated Resources	2024-03-13	Discussion of: AI-assisted Automated Workflow for Real-time X-ray Ptychography Data Analysis via Federated Resources
arXiv.org	DOE/NSF Workshop on Correctness in Scientific Computing	2024-01-17	Discussion of: DOE/NSF Workshop on Correctness in Scientific Computing
CPC	Deep learning level-3 electron trigger for CLAS12	2023-10-04	Discussion of: Deep learning level-3 electron trigger for CLAS12
HPDC'23	Auto-HPCnet: An Automatic Framework to Build Neural Network-based Surrogate for High-Performance Computing Applications	2023-08-09	Discussion of: An Automatic Framework to Build Neural Network-based Surrogate for High-Performance Computing Applications
arXiv.org	Conservative Prediction via Data-Driven Confidence Minimization	2023-07-05	Discussion of: Conservative Prediction via Data-Driven Confidence Minimization
arXiv.org	Myths and Legends in High-Performance Computing	2023-02-15	Discussion of: Myths and Legends in High-Performance Computing
IEEEXplore	Energy-Aware Non-Preemptive Task Scheduling With Deadline Constraint in DVFS-Enabled Heterogeneous Clusters	2023-01-18	Discussion of: Energy-Aware Non-Preemptive Task Scheduling With Deadline Constraint in DVFS-Enabled Heterogeneous Clusters
Computing & Software For Big Science	Future Trends in Nuclear Physics Computing	2022-07-06	Discussion of: Future Trends in Nuclear Physics Computing
arXiv.org	The Convergence of Markov chain Monte Carlo Methods: From the Metropolis method to Hamiltonian Monte Carlo	2022-06-22	Discussion of: The Convergence of Markov chain Monte Carlo Methods: From the Metropolis method to Hamiltonian Monte Carlo
Distill	Multimodal Neurons in Artificial Neural Networks	2022-05-11	Discussion of: Multimodal Neurons in Artificial Neural Networks
Nature	Magnetic control of tokamak plasmas through deep reinforcement learning	2022-03-30	Discussion of: Magnetic control of tokamak plasmas through deep reinforcement learning
arXiv.org	A 20 Gbps PAM4 Data Transmitter ASIC for Particle Physics Experiments	2022-03-02	Discussion of: A 20 Gbps PAM4 Data Transmitter ASIC for Particle Physics Experiments
EAoAI	A tutorial on solving ordinary differential equations using Python and hybrid physics-informed neural network	2022-02-02	Discussion of: A tutorial on solving ordinary differential equations using Python and hybrid physics-informed neural network
NIM	Classical and machine learning methods for event reconstruction in NeuLAND	2022-01-19	Discussion of: Learning Classical and machine learning methods for event reconstruction in NeuLAND
arXiv.org	Learning Deep Features for Discriminative Localization	2021-11-01	Discussion of: Learning Deep Features for Discriminative Localization
IEEE	Moving Compute towards Data in Heterogeneous multi-FPGA Clusters using Partial Reconfiguration and I/O Virtualisation	2021-09-27	Discussion of: Moving Compute towards Data in Heterogeneous multi-FPGA Clusters using Partial Reconfiguration and I/O Virtualisation
CPC	Real-time data processing in the ALICE High Level Trigger at the LHC	2021-08-30	Discussion of: RT data processing for ALICE HLT
arXiv.org	Mask R-CNN	2021-07-19	Discussion of: Mask R-CNN
(multi)	Julia paper YouTube talk Neural ODEs w/ Julia (blog)	2021-06-21	Discussion of: Julia
NIM	Throttling strategies and optimization of the trigger-less streaming DAQ system in the CBM experiment	2021-06-07	discussion
IEEE Xplore	Explaining Deep Neural Networks and Beyond: A Review of Methods and Applications	2021-05-24	discussion
CPC	HEP-Frame: Improving the efficiency of pipelined data transformation & filtering for scientific analyses	2021-04-30	discussion
CPC	Jas4pp — A data-analysis framework for physics and detector studies	2021-03-15	discussion
vCHEP	Hydra TriDAS+JANA2 HOSS!	2021-03-01	discussion
CPC	Development of FPGA based phase alignment logic for the high speed protocol in HEP Experiments	2020-11-23	discussion
CPC	FeynGame	2020-10-12	discussion
N/A	Python Global Interpreter Lock RealPython GIL	2020-09-28	discussion
SoftwareX	Mcfly: Automated deep learning on time series	2020-09-07	discussion
SoftwareX	GeoRocket: A scalable and cloud-based data store for big geospatial files	2020-08-24	discussion
CPC	The Control Unit of the KM3NeT Data Acquisition System	2020-07-20	discussion
SoftwareX	Qudi: A modular python suite for experiment control and data processing	2020-06-29	discussion